Supported formats
Tabular formats
| Extension | Description | Source |
|---|---|---|
| .txt | Plain text | Core |
| .csv | Comma-separated values | Core |
| .tsv | Tab-separated values | Core |
| .xml | Extensible Markup Language | Core |
| .json | JavaScript Object Notation | Core |
| .HTML | HyperText Markup Language | Core |
| .xlsx | Excel | Core |
| .edf | European Data Format | Core |
| .sas7bdat | SAS database file | Core |
| .kxl | KeyCreator eXtensible Language | Core |
| .rds, .rda | R Data Format | Core |
| .h5 | Hierarchical Data Format | Core |
| .nc | NetCDF | Core |
| .mat | MATLAB MAT | Core |
| .d42 | Datagrok project | Core |
| .zip | ZIP archive (for supported types) | Core |
| .gz, .gzip | gzip | Core |
| .tar | Tape archive | Core |
| netCDF | network Common Data Form | Core |
| .kml, .kmz | Keyhole Markup Language (geographic annotations) | GIS |
| .parquet | Efficient data storage and retrieval | Arrow |
| .feather | portable file format for storing Arrow tables | Arrow |
| .sqlite | SQLite database | Dendrogram |
Molecule structure formats
| Extension | Description | Source |
|---|---|---|
| .smi | Structure-data file | Chem |
| .sdf | Structure-data file | Chem |
| .mol | MDL Molfile | Chem |
| .mol2 | SYBYL molecule representation | Chem |
Molecule3D structure formats
| Extension | Description | Source | Viewer |
|---|---|---|---|
| .brix | (preview) Electron Density Map | BiostructureViewer | |
| .ccp4 | Collaborative Computational Project Number 4 electron density | BiostructureViewer | NGL |
| .cif | (preview) Crystallographic Information File | BiostructureViewer | |
| .cifCore | Crystallographic Information Core File | BiostructureViewer | Biostructure |
| .cns | Density ? | BiostructureViewer | NGL |
| .cub | (preview) Orbital/Density Values on a 3D Grid | BiostructureViewer | |
| .cube | (preview) Orbital/Density Values on a 3D Grid | BiostructureViewer | |
| .dsn6 | (preview) Ribbons FRODO Map | BiostructureViewer | |
| .dx | (preview) Chemical Spectroscopy Format | BiostructureViewer | |
| .dxbin | (preview) .dxbin | BiostructureViewer | |
| .ent | (preview) Brookhaven PDB Molecule | BiostructureViewer | |
| .gro | GROMACS | BiostructureViewer | Biostructure |
| .mcif | (preview) Macromolecular Crystallographic Information File | BiostructureViewer | |
| .mmCif | Macromolecular Crystallographic Information File | BiostructureViewer | Biostructure |
| .mmtf | Macromolecular Transmission Format | BiostructureViewer | NGL |
| .mrc | (preview) Electron Density Map | BiostructureViewer | |
| .obj | Wavefront .obj file | BiostructureViewer | NGL |
| .parm7 | (preview) AMBER Parameter/Topology File | BiostructureViewer | |
| .pdb | Protein Data Bank | BiostructureViewer | Biostructure |
| .pdbqt | Protein Data Bank, Partial Charge (Q), & Atom Type (T) | BiostructureViewer | Biostructure |
| .ply | Polygon file format | BiostructureViewer | NGL |
| .psf | (preview) Protein Structure File | BiostructureViewer | |
| .sd | (preview) Structure-Data | BiostructureViewer | |
| .prmtop | Parameter / Topology (AMBER) | BiostructureViewer | NGL |
| .top | Gromacs Topology File | BiostructureViewer | NGL |
| .xplor | (preview) Electron Density Map | BiostructureViewer | |
| .xyz | (preview) Cartesian Coordinates Format | BiostructureViewer |
Macromolecule formats
| Extension | Description | Source |
|---|---|---|
| .fasta | FASTA format (fa, fna, ffn, faa, frn, fa, fst) | [Bio] |
Note: The platform detector also recognizes semantic types of Macromolecule in files that are in Tabular format.
Miscellaneous
| Extension | Description | Source |
|---|---|---|
| .ipynb | Jupyter Notebook | Notebooks |
| .ipv | Interactive differential equations | Dendrogram |
| Portable document format | FileEditors | |
| .docx | MS Word | FileEditors |
| .jdx,dx,nmrium | NMR | NMRium |
| .jdx | Spectroscopy | ChemSpectraViewer |
See also: